Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 AL357033.4-201ENST00000617703 1807 ntBASIC21.46■■□□□ 1.03
CLIC4Q9Y696 AC073592.3-201ENST00000625118 1834 ntBASIC21.46■■□□□ 1.03
CLIC4Q9Y696 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 AC142381.4-202ENST00000563973 229 ntBASIC21.46■■□□□ 1.03
CLIC4Q9Y696 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC4Q9Y696 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.45■■□□□ 1.03
CLIC4Q9Y696 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 CD177P1-201ENST00000606252 935 ntBASIC21.45■■□□□ 1.02
CLIC4Q9Y696 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC4Q9Y696 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 AC018470.1-201ENST00000624790 3129 ntBASIC21.44■■□□□ 1.02
CLIC4Q9Y696 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC4Q9Y696 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 AC008622.2-201ENST00000617006 1229 ntBASIC21.43■■□□□ 1.02
CLIC4Q9Y696 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 RCC2P3-201ENST00000418112 1537 ntBASIC21.43■■□□□ 1.02
CLIC4Q9Y696 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC4Q9Y696 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC4Q9Y696 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms