Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 MIR564-202ENST00000385049 94 ntBASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 AC068587.9-201ENST00000641814 219 ntBASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 UBQLN4P1-201ENST00000461599 1801 ntBASIC28.38■■■□□ 2.13
CDC42BPBQ9Y5S2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 MTMR9LP-203ENST00000426597 1545 ntBASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDC42BPBQ9Y5S2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 AC018712.1-201ENST00000455767 687 ntBASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 AC079776.4-201ENST00000511039 504 ntBASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
CDC42BPBQ9Y5S2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 AL157384.1-201ENST00000445995 2473 ntBASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 PMS2P1-201ENST00000431037 1228 ntBASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 VENTXP7-201ENST00000475503 772 ntBASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
CDC42BPBQ9Y5S2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 KRT8P50-201ENST00000562022 1438 ntBASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 AC243591.1-201ENST00000452967 1364 ntBASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
CDC42BPBQ9Y5S2 IRX1P1-201ENST00000438849 1838 ntBASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 HES2-202ENST00000377836 507 ntTSL 2 BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 MIR574-201ENST00000385209 96 ntBASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 Z98044.1-201ENST00000632503 1764 ntBASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDC42BPBQ9Y5S2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
CDC42BPBQ9Y5S2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC28.32■■■□□ 2.12
CDC42BPBQ9Y5S2 AL353692.3-201ENST00000407031 1396 ntBASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms