Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 AL121906.2-201ENST00000621597 723 ntBASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 AC073648.6-201ENST00000641589 218 ntBASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 PCDHA12-202ENST00000613593 2588 ntBASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 AL161938.1-201ENST00000569833 2180 ntBASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
R3HCC1Q9Y3T6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
R3HCC1Q9Y3T6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 AC069544.1-201ENST00000609399 999 ntBASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 HTR7P1-202ENST00000624664 4411 ntBASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
R3HCC1Q9Y3T6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
R3HCC1Q9Y3T6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.41■■□□□ 1.02
R3HCC1Q9Y3T6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms