Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 AC080038.1-201ENST00000611274 1154 ntBASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 HLA-B-256ENST00000639848 1089 ntBASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UBE2D4Q9Y2X8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.08□□□□□ -0.31
UBE2D4Q9Y2X8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
UBE2D4Q9Y2X8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.08□□□□□ -0.31
UBE2D4Q9Y2X8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBE2D4Q9Y2X8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UBE2D4Q9Y2X8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 MIR663A-201ENST00000385250 93 ntBASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 AC026271.2-201ENST00000428091 497 ntBASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 AL160286.2-201ENST00000567150 934 ntBASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 AC120498.8-201ENST00000614275 531 ntBASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.08□□□□□ -0.32
UBE2D4Q9Y2X8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AL162430.1-201ENST00000480705 870 ntBASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 RARRES2P6-201ENST00000567333 442 ntBASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.07□□□□□ -0.32
UBE2D4Q9Y2X8 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms