Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 FEM1AP3-201ENST00000403722 1741 ntBASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ERGIC3Q9Y282 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ERGIC3Q9Y282 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
ERGIC3Q9Y282 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 AC083906.6-201ENST00000641366 219 ntBASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 AC012317.2-201ENST00000623305 2251 ntBASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ERGIC3Q9Y282 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 AC018695.7-201ENST00000624587 2492 ntBASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 AL589743.5-201ENST00000616611 1050 ntBASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ERGIC3Q9Y282 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ERGIC3Q9Y282 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms