Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 HLA-G-202ENST00000376815 851 ntBASIC17.7■□□□□ 0.42
RNF6Q9Y252 HLA-G-203ENST00000376818 1127 ntBASIC17.7■□□□□ 0.42
RNF6Q9Y252 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF6Q9Y252 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF6Q9Y252 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 FP475955.4-201ENST00000623131 1990 ntBASIC17.69■□□□□ 0.42
RNF6Q9Y252 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 AC093525.10-201ENST00000625130 1569 ntBASIC17.69■□□□□ 0.42
RNF6Q9Y252 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF6Q9Y252 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF6Q9Y252 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 BICD1-207ENST00000551848 1962 ntBASIC17.68■□□□□ 0.42
RNF6Q9Y252 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 AP002982.1-201ENST00000492365 877 ntBASIC17.68■□□□□ 0.42
RNF6Q9Y252 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 Z98044.1-201ENST00000632503 1764 ntBASIC17.68■□□□□ 0.42
RNF6Q9Y252 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RNF6Q9Y252 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RNF6Q9Y252 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 AL354751.1-201ENST00000412768 1863 ntBASIC17.67■□□□□ 0.42
RNF6Q9Y252 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RNF6Q9Y252 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF6Q9Y252 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms