Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 KRT8P3-201ENST00000519669 1449 ntBASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 SCARNA2-201ENST00000458748 420 ntBASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 FAM215A-202ENST00000632077 792 ntBASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
ZC3H4Q9UPT8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.7■■□□□ 1.23
ZC3H4Q9UPT8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
ZC3H4Q9UPT8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.23
ZC3H4Q9UPT8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AL591684.3-201ENST00000605187 298 ntBASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AC027601.4-201ENST00000611259 610 ntBASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.7■■□□□ 1.22
ZC3H4Q9UPT8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 RPSAP43-201ENST00000402237 625 ntBASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 GPX1P2-201ENST00000429271 606 ntBASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AL591424.1-201ENST00000442569 1213 ntBASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 AL049840.3-201ENST00000602669 611 ntBASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
ZC3H4Q9UPT8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 AC009237.14-201ENST00000609975 1594 ntBASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 RPS2P28-201ENST00000314255 741 ntBASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 MIR3180-4-201ENST00000582223 153 ntBASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 BNIP3P18-201ENST00000593976 575 ntBASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 AC104417.2-201ENST00000562989 1793 ntBASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
ZC3H4Q9UPT8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 HIST2H3DP1-201ENST00000401004 416 ntBASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
ZC3H4Q9UPT8 AC114341.1-201ENST00000618070 349 ntBASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms