Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 AC104417.2-201ENST00000562989 1793 ntBASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 AC005332.1-201ENST00000577698 1310 ntBASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 Z82202.1-201ENST00000623446 1880 ntBASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HDAC6Q9UBN7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 MIR4674-201ENST00000582457 87 ntBASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.21■□□□□ 0.99
HDAC6Q9UBN7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
HDAC6Q9UBN7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 AC093458.2-201ENST00000623150 629 ntBASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 AC116407.4-201ENST00000623319 1061 ntBASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.2■□□□□ 0.98
HDAC6Q9UBN7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 AP000523.1-201ENST00000398242 1049 ntBASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 AC112907.2-201ENST00000448639 330 ntBASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 GCSHP2-201ENST00000560971 527 ntBASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 NEK4P2-201ENST00000580004 1012 ntBASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HDAC6Q9UBN7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HDAC6Q9UBN7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms