Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CYP2D8P-201ENST00000433633 1490 ntBASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 TSPY14P-201ENST00000303979 915 ntBASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 NAPSB-206ENST00000562112 1266 ntBASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.56■□□□□ 0.72
PPARGC1AQ9UBK2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 HCG11-201ENST00000411553 5696 ntBASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 KRT8P3-201ENST00000519669 1449 ntBASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 EGLN1P1-201ENST00000531623 762 ntBASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 AC010947.1-201ENST00000623454 693 ntBASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PPARGC1AQ9UBK2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 AC026471.1-201ENST00000564629 3026 ntBASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 AL023803.3-201ENST00000615559 522 ntBASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 AL161938.1-201ENST00000569833 2180 ntBASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.54■□□□□ 0.72
PPARGC1AQ9UBK2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PPARGC1AQ9UBK2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms