Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 KRT8P3-201ENST00000519669 1449 ntBASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NLGN3Q9NZ94 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 AC092597.1-201ENST00000487352 616 ntBASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
NLGN3Q9NZ94 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NLGN3Q9NZ94 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 TPM4P1-201ENST00000436100 807 ntBASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 NPAP1P7-201ENST00000613027 823 ntBASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 AL691432.3-201ENST00000621860 400 ntBASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NLGN3Q9NZ94 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms