Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC064862.7-201ENST00000604520 867 ntBASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC26.89■■□□□ 1.9
SLC52A1Q9NWF4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SLC52A1Q9NWF4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
SLC52A1Q9NWF4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC26.89■■□□□ 1.89
SLC52A1Q9NWF4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
SLC52A1Q9NWF4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 AC091607.1-201ENST00000490318 1060 ntBASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 AC120114.3-201ENST00000611923 658 ntBASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SLC52A1Q9NWF4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 AL590627.1-203ENST00000421194 1026 ntBASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 ABR-217ENST00000572441 563 ntTSL 4 BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
SLC52A1Q9NWF4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 POM121L3P-201ENST00000419331 1163 ntBASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 NME4-212ENST00000621774 904 ntTSL 3 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 TP73-AS1-207ENST00000624167 988 ntBASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 AC117500.6-201ENST00000624871 588 ntBASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 UBQLN4P1-201ENST00000461599 1801 ntBASIC26.86■■□□□ 1.89
SLC52A1Q9NWF4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 EMD-201ENST00000369835 966 ntTSL 3 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AP000593.1-201ENST00000393668 712 ntBASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AC009065.1-201ENST00000564055 1225 ntBASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC26.85■■□□□ 1.89
SLC52A1Q9NWF4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 AC068587.9-201ENST00000641814 219 ntBASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC26.84■■□□□ 1.89
SLC52A1Q9NWF4 PWWP2AP1-201ENST00000429776 2273 ntBASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
SLC52A1Q9NWF4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms