Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 BCL2-203ENST00000589955 5011 ntBASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCF3Q9NUQ8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
ABCF3Q9NUQ8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ABCF3Q9NUQ8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 POU5F1P3-201ENST00000428824 1078 ntBASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 AC069544.1-201ENST00000609399 999 ntBASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 ABALON-201ENST00000629058 1903 ntBASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ABCF3Q9NUQ8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 TFP1-202ENST00000475455 1573 ntBASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 PRKY-204ENST00000533551 1019 ntBASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCF3Q9NUQ8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ABCF3Q9NUQ8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCF3Q9NUQ8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.05■□□□□ 0.64
ABCF3Q9NUQ8 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms