Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 SLC25A6P5-201ENST00000435663 894 ntBASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC52A3Q9NQ40 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 MYC-208ENST00000641036 567 ntBASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 AC134043.2-201ENST00000624206 2238 ntBASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC52A3Q9NQ40 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 AC138028.4-201ENST00000564984 1845 ntBASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 AC233263.1-201ENST00000578059 224 ntBASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 AL109923.1-201ENST00000618799 583 ntBASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC52A3Q9NQ40 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms