Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SSU72Q9NP77 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SSU72Q9NP77 AC008556.1-201ENST00000610908 2040 ntBASIC18.66■□□□□ 0.58
SSU72Q9NP77 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 AL121832.2-201ENST00000610979 668 ntBASIC18.65■□□□□ 0.58
SSU72Q9NP77 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SSU72Q9NP77 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.65■□□□□ 0.58
SSU72Q9NP77 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 FLJ13224-201ENST00000313737 1514 ntBASIC18.64■□□□□ 0.58
SSU72Q9NP77 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.64■□□□□ 0.58
SSU72Q9NP77 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SSU72Q9NP77 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 C1QL1P1-201ENST00000568105 661 ntBASIC18.64■□□□□ 0.57
SSU72Q9NP77 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSU72Q9NP77 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.64■□□□□ 0.57
SSU72Q9NP77 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 POU5F1P3-201ENST00000428824 1078 ntBASIC18.63■□□□□ 0.57
SSU72Q9NP77 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 PNMA6B-201ENST00000538162 1200 ntBASIC18.63■□□□□ 0.57
SSU72Q9NP77 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 KRT8P3-201ENST00000519669 1449 ntBASIC18.63■□□□□ 0.57
SSU72Q9NP77 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SSU72Q9NP77 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSU72Q9NP77 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms