Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 ARMC10P1-201ENST00000313754 855 ntBASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VAT1LQ9HCJ6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.75■■□□□ 1.07
VAT1LQ9HCJ6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 MIR3180-5-201ENST00000583743 153 ntBASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 KRT8P32-201ENST00000512863 1461 ntBASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VAT1LQ9HCJ6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 AC063952.2-201ENST00000498792 1227 ntBASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VAT1LQ9HCJ6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms