Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AC125437.2-201ENST00000625180 2167 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AC007618.1-201ENST00000366455 732 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 HMGA1P5-201ENST00000412453 271 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AL353719.1-201ENST00000566847 864 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AL138966.2-201ENST00000621997 464 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 AL590326.2-201ENST00000625139 305 ntBASIC20.82■□□□□ 0.92
RNF39Q9H2S5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF39Q9H2S5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 ARMC10P1-201ENST00000313754 855 ntBASIC20.81■□□□□ 0.92
RNF39Q9H2S5 HNRNPDP2-201ENST00000406475 478 ntBASIC20.81■□□□□ 0.92
RNF39Q9H2S5 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 KATNBL1P4-201ENST00000503545 918 ntBASIC20.81■□□□□ 0.92
RNF39Q9H2S5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 AC079598.2-201ENST00000599191 1294 ntBASIC20.81■□□□□ 0.92
RNF39Q9H2S5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF39Q9H2S5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AL050305.1-201ENST00000399993 1230 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC019070.1-201ENST00000415008 1024 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 TSPY17P-201ENST00000450329 467 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 WWOX-216ENST00000569818 525 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC092954.1-201ENST00000609121 445 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC020658.4-201ENST00000613987 684 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AL512324.3-201ENST00000619383 882 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 AC010653.2-201ENST00000623505 997 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 MTND4P34-201ENST00000572715 1371 ntBASIC20.8■□□□□ 0.92
RNF39Q9H2S5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RNF39Q9H2S5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 NREP-217ENST00000509025 987 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF39Q9H2S5 NTF6B-201ENST00000591913 560 ntBASIC20.79■□□□□ 0.92
RNF39Q9H2S5 AC068790.2-201ENST00000602601 557 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms