Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 AL359258.3-201ENST00000622910 2331 ntBASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
CYSTM1Q9H1C7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 AC126177.1-201ENST00000547829 2218 ntBASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 FAM45BP-202ENST00000592932 1624 ntBASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC10.9□□□□□ -0.66
CYSTM1Q9H1C7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.67
CYSTM1Q9H1C7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 BX005040.4-201ENST00000637145 1518 ntBASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 MIR3960-201ENST00000583311 91 ntBASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 AC139749.1-202ENST00000617529 3139 ntBASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.89□□□□□ -0.67
CYSTM1Q9H1C7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms