Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 AC034232.1-201ENST00000506026 1064 ntBASIC19.46■□□□□ 0.71
RNF38Q9H0F5 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF38Q9H0F5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 MIR564-202ENST00000385049 94 ntBASIC19.45■□□□□ 0.7
RNF38Q9H0F5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 AC079602.3-201ENST00000623931 403 ntBASIC19.45■□□□□ 0.7
RNF38Q9H0F5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RNF38Q9H0F5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 AL157888.1-201ENST00000631930 593 ntBASIC19.44■□□□□ 0.7
RNF38Q9H0F5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF38Q9H0F5 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 KRT18P23-201ENST00000435622 1283 ntBASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 AC068587.9-201ENST00000641814 219 ntBASIC19.43■□□□□ 0.7
RNF38Q9H0F5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF38Q9H0F5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms