Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 KRT8P41-201ENST00000533985 1514 ntBASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 AC067852.2-201ENST00000590513 2313 ntBASIC15.88■□□□□ 0.13
HDHD3Q9BSH5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 AC073592.3-201ENST00000625118 1834 ntBASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HDHD3Q9BSH5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 AC104771.1-201ENST00000603335 964 ntBASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 HEIH-201ENST00000623091 1652 ntBASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 LTB4R2-202ENST00000528054 3092 ntBASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HDHD3Q9BSH5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 RCC2P6-201ENST00000526625 1557 ntBASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 UNC93B5-201ENST00000530315 699 ntBASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 AC008403.3-201ENST00000598924 454 ntBASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 HTR7P1-202ENST00000624664 4411 ntBASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.85■□□□□ 0.13
HDHD3Q9BSH5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms