Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX2Q9BQ50 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 AL353807.1-201ENST00000427475 662 ntBASIC17.65■□□□□ 0.42
TREX2Q9BQ50 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 AL590326.2-201ENST00000625139 305 ntBASIC17.65■□□□□ 0.42
TREX2Q9BQ50 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TREX2Q9BQ50 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TREX2Q9BQ50 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TREX2Q9BQ50 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 AL355355.2-201ENST00000442321 338 ntBASIC17.64■□□□□ 0.41
TREX2Q9BQ50 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 Z85996.1-201ENST00000494644 937 ntBASIC17.64■□□□□ 0.41
TREX2Q9BQ50 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TREX2Q9BQ50 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 AC005082.1-201ENST00000413042 2259 ntBASIC17.63■□□□□ 0.41
TREX2Q9BQ50 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 AC090164.3-201ENST00000610780 2143 ntBASIC17.63■□□□□ 0.41
TREX2Q9BQ50 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TREX2Q9BQ50 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms