Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.27■□□□□ 0.52
PKP4Q99569 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 TSPY14P-201ENST00000303979 915 ntBASIC18.27■□□□□ 0.52
PKP4Q99569 INGX-201ENST00000359239 846 ntBASIC18.27■□□□□ 0.52
PKP4Q99569 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
PKP4Q99569 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 TSPY17P-201ENST00000450329 467 ntBASIC18.27■□□□□ 0.52
PKP4Q99569 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.27■□□□□ 0.52
PKP4Q99569 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.27■□□□□ 0.52
PKP4Q99569 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.27■□□□□ 0.52
PKP4Q99569 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.27■□□□□ 0.52
PKP4Q99569 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.27■□□□□ 0.52
PKP4Q99569 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 NAPSB-206ENST00000562112 1266 ntBASIC18.27■□□□□ 0.52
PKP4Q99569 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PKP4Q99569 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.27■□□□□ 0.52
PKP4Q99569 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.27■□□□□ 0.52
PKP4Q99569 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
PKP4Q99569 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.27■□□□□ 0.52
PKP4Q99569 MTMR9LP-203ENST00000426597 1545 ntBASIC18.27■□□□□ 0.51
PKP4Q99569 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.27■□□□□ 0.51
PKP4Q99569 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKP4Q99569 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKP4Q99569 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 AC092338.2-201ENST00000568827 1415 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
PKP4Q99569 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.26■□□□□ 0.51
PKP4Q99569 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 CCR12P-201ENST00000446203 998 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 AP003041.3-201ENST00000527151 707 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 EGLN1P1-201ENST00000531623 762 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 MIR4674-201ENST00000582457 87 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 AC116562.4-202ENST00000641738 218 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
PKP4Q99569 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PKP4Q99569 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.26■□□□□ 0.51
PKP4Q99569 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.26■□□□□ 0.51
PKP4Q99569 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.25■□□□□ 0.51
PKP4Q99569 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PKP4Q99569 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.25■□□□□ 0.51
PKP4Q99569 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.25■□□□□ 0.51
PKP4Q99569 AC087499.1-201ENST00000418141 1075 ntBASIC18.25■□□□□ 0.51
PKP4Q99569 AC007663.1-201ENST00000438948 1240 ntBASIC18.25■□□□□ 0.51
PKP4Q99569 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.25■□□□□ 0.51
PKP4Q99569 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.25■□□□□ 0.51
PKP4Q99569 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.25■□□□□ 0.51
PKP4Q99569 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PKP4Q99569 Z98044.1-201ENST00000632503 1764 ntBASIC18.25■□□□□ 0.51
PKP4Q99569 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 AC008556.1-201ENST00000610908 2040 ntBASIC18.24■□□□□ 0.51
PKP4Q99569 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.24■□□□□ 0.51
PKP4Q99569 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.24■□□□□ 0.51
PKP4Q99569 MCCD1P1-208ENST00000445732 328 ntBASIC18.24■□□□□ 0.51
PKP4Q99569 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PKP4Q99569 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PKP4Q99569 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms