Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 FAM215A-202ENST00000632077 792 ntBASIC20.47■□□□□ 0.87
ALPK3Q96L96 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ALPK3Q96L96 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ALPK3Q96L96 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.46■□□□□ 0.87
ALPK3Q96L96 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 AC007967.2-201ENST00000432613 625 ntBASIC20.46■□□□□ 0.87
ALPK3Q96L96 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 Z83851.2-201ENST00000609564 659 ntBASIC20.46■□□□□ 0.87
ALPK3Q96L96 AP001269.4-201ENST00000609611 512 ntBASIC20.46■□□□□ 0.87
ALPK3Q96L96 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.46■□□□□ 0.87
ALPK3Q96L96 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALPK3Q96L96 SDHAP1-207ENST00000440850 2000 ntBASIC20.46■□□□□ 0.87
ALPK3Q96L96 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.45■□□□□ 0.87
ALPK3Q96L96 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 CALY-203ENST00000368558 825 ntTSL 5 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 AL353692.3-201ENST00000407031 1396 ntBASIC20.45■□□□□ 0.86
ALPK3Q96L96 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 RNA5SP415-201ENST00000517246 115 ntBASIC20.45■□□□□ 0.86
ALPK3Q96L96 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 AC040169.1-201ENST00000565382 521 ntBASIC20.45■□□□□ 0.86
ALPK3Q96L96 AC011840.4-201ENST00000578471 627 ntBASIC20.45■□□□□ 0.86
ALPK3Q96L96 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.45■□□□□ 0.86
ALPK3Q96L96 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALPK3Q96L96 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALPK3Q96L96 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALPK3Q96L96 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 AL035633.1-201ENST00000406139 838 ntBASIC20.44■□□□□ 0.86
ALPK3Q96L96 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.44■□□□□ 0.86
ALPK3Q96L96 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALPK3Q96L96 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALPK3Q96L96 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 KRT8P7-201ENST00000533003 1432 ntBASIC20.43■□□□□ 0.86
ALPK3Q96L96 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 AC112482.1-201ENST00000492080 688 ntBASIC20.43■□□□□ 0.86
ALPK3Q96L96 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 MIR3197-201ENST00000582241 73 ntBASIC20.43■□□□□ 0.86
ALPK3Q96L96 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.43■□□□□ 0.86
ALPK3Q96L96 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALPK3Q96L96 AC114341.1-201ENST00000618070 349 ntBASIC20.43■□□□□ 0.86
ALPK3Q96L96 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ALPK3Q96L96 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms