Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 MTMR9LP-203ENST00000426597 1545 ntBASIC19.87■□□□□ 0.77
CALR3Q96L12 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.87■□□□□ 0.77
CALR3Q96L12 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
CALR3Q96L12 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CALR3Q96L12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.87■□□□□ 0.77
CALR3Q96L12 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.87■□□□□ 0.77
CALR3Q96L12 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.87■□□□□ 0.77
CALR3Q96L12 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CALR3Q96L12 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CALR3Q96L12 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CALR3Q96L12 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
CALR3Q96L12 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.86■□□□□ 0.77
CALR3Q96L12 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 AC133681.1-201ENST00000465482 601 ntBASIC19.86■□□□□ 0.77
CALR3Q96L12 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.86■□□□□ 0.77
CALR3Q96L12 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.86■□□□□ 0.77
CALR3Q96L12 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CALR3Q96L12 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.86■□□□□ 0.77
CALR3Q96L12 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.86■□□□□ 0.77
CALR3Q96L12 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CALR3Q96L12 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CALR3Q96L12 KRT8P11-201ENST00000409686 1436 ntBASIC19.85■□□□□ 0.77
CALR3Q96L12 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CALR3Q96L12 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.85■□□□□ 0.77
CALR3Q96L12 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.85■□□□□ 0.77
CALR3Q96L12 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.85■□□□□ 0.77
CALR3Q96L12 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.85■□□□□ 0.77
CALR3Q96L12 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CALR3Q96L12 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.85■□□□□ 0.77
CALR3Q96L12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.85■□□□□ 0.77
CALR3Q96L12 KRT8P45-201ENST00000414328 1447 ntBASIC19.85■□□□□ 0.77
CALR3Q96L12 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CALR3Q96L12 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CALR3Q96L12 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 AC239809.2-201ENST00000415381 517 ntBASIC19.84■□□□□ 0.77
CALR3Q96L12 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.84■□□□□ 0.77
CALR3Q96L12 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.84■□□□□ 0.77
CALR3Q96L12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 AL353708.3-201ENST00000610272 989 ntBASIC19.84■□□□□ 0.77
CALR3Q96L12 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CALR3Q96L12 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.84■□□□□ 0.77
CALR3Q96L12 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CALR3Q96L12 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CALR3Q96L12 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms