Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 MIR564-202ENST00000385049 94 ntBASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 AC092647.4-201ENST00000457211 535 ntBASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMARCD1Q96GM5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 FAM8A6P-201ENST00000407496 1135 ntBASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 HOMER2P1-201ENST00000455653 964 ntBASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 GCSHP2-201ENST00000560971 527 ntBASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMARCD1Q96GM5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 AC112497.1-201ENST00000624824 639 ntBASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 KRT8P7-201ENST00000533003 1432 ntBASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMARCD1Q96GM5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 AC034236.2-201ENST00000606662 1610 ntBASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 MTMR9LP-203ENST00000426597 1545 ntBASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMARCD1Q96GM5 KRT18P35-201ENST00000510488 1269 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms