Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VTI1AQ96AJ9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 TSPY21P-201ENST00000433481 731 ntBASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 TSPY23P-201ENST00000440136 739 ntBASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 BX276092.5-203ENST00000456199 560 ntBASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 AC024243.1-201ENST00000609234 778 ntBASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
VTI1AQ96AJ9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 AC007952.6-201ENST00000573168 2673 ntBASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 AC003957.1-201ENST00000625108 2673 ntBASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 SPDYE13P-201ENST00000445314 798 ntBASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 NPAP1P7-201ENST00000613027 823 ntBASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VTI1AQ96AJ9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VTI1AQ96AJ9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.16■□□□□ 0.98
VTI1AQ96AJ9 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms