Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 AL023803.3-201ENST00000615559 522 ntBASIC17.72■□□□□ 0.43
TM9SF4Q92544 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TM9SF4Q92544 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.72■□□□□ 0.43
TM9SF4Q92544 LETM1P2-201ENST00000597330 2178 ntBASIC17.72■□□□□ 0.43
TM9SF4Q92544 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TM9SF4Q92544 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TM9SF4Q92544 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TM9SF4Q92544 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TM9SF4Q92544 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.71■□□□□ 0.42
TM9SF4Q92544 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TM9SF4Q92544 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TM9SF4Q92544 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
TM9SF4Q92544 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
TM9SF4Q92544 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AC009237.14-201ENST00000609975 1594 ntBASIC17.7■□□□□ 0.42
TM9SF4Q92544 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AL358472.4-201ENST00000633140 710 ntBASIC17.7■□□□□ 0.42
TM9SF4Q92544 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
TM9SF4Q92544 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TM9SF4Q92544 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 CKBP1-201ENST00000565489 1086 ntBASIC17.69■□□□□ 0.42
TM9SF4Q92544 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 MYC-208ENST00000641036 567 ntBASIC17.69■□□□□ 0.42
TM9SF4Q92544 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.69■□□□□ 0.42
TM9SF4Q92544 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TM9SF4Q92544 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms