Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC005593.1-201ENST00000624894 515 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 PHGDH-210ENST00000641115 1638 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC108073.2-201ENST00000464002 357 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 HNRNPUP1-201ENST00000554987 333 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AL662799.1-202ENST00000614205 422 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AP000867.4-201ENST00000641616 219 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 VENTXP7-201ENST00000475503 772 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 GUSBP12-201ENST00000513727 720 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC022145.2-201ENST00000598203 171 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC006538.1-201ENST00000567905 1585 ntBASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
SYNE2Q8WXH0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC7.59□□□□□ -1.2
SYNE2Q8WXH0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 MIR663B-201ENST00000408361 115 ntBASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 GRAMD4P1-201ENST00000435181 1110 ntBASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 KLF2P3-201ENST00000451977 1087 ntBASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 PGF-202ENST00000405431 666 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 LDHBP1-201ENST00000455730 1119 ntBASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 GATB-205ENST00000508611 605 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC7.58□□□□□ -1.2
SYNE2Q8WXH0 AC004817.3-201ENST00000602957 2129 ntBASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms