Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 AC098934.4-201ENST00000564127 592 ntBASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RPS4Y2Q8TD47 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RPS4Y2Q8TD47 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.46■□□□□ 0.22
RPS4Y2Q8TD47 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
RPS4Y2Q8TD47 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC138932.1-201ENST00000534164 6830 ntBASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 Z85996.1-201ENST00000494644 937 ntBASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 MYC-208ENST00000641036 567 ntBASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC093677.2-201ENST00000600169 1863 ntBASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AC135776.1-201ENST00000319817 2481 ntBASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RPS4Y2Q8TD47 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 CD99P1-205ENST00000527459 561 ntBASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 KRT18P6-201ENST00000555540 1265 ntBASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 AC112777.1-201ENST00000540175 1423 ntBASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.44■□□□□ 0.22
RPS4Y2Q8TD47 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RPS4Y2Q8TD47 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms