Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 AL138966.2-201ENST00000621997 464 ntBASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 IRX1P1-201ENST00000438849 1838 ntBASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FNDC9Q8TBE3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.89■□□□□ 0.3
FNDC9Q8TBE3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNDC9Q8TBE3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FNDC9Q8TBE3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 AL049597.2-201ENST00000565575 961 ntBASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 AL512604.3-201ENST00000569583 964 ntBASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 AC008622.2-201ENST00000617006 1229 ntBASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.89■□□□□ 0.29
FNDC9Q8TBE3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 KRT8P45-201ENST00000414328 1447 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 AC120498.9-201ENST00000339021 3867 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 BX664615.1-201ENST00000443558 458 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 AC104076.2-201ENST00000448912 469 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 MIR4674-201ENST00000582457 87 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 AC006011.2-201ENST00000621313 1158 ntBASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.88■□□□□ 0.29
FNDC9Q8TBE3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.87■□□□□ 0.29
FNDC9Q8TBE3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms