Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDH19Q8TAB3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 AL499627.1-201ENST00000569373 2188 ntBASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 CRYGFP-201ENST00000418459 633 ntBASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 LINC01023-201ENST00000606054 436 ntBASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDH19Q8TAB3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PCDH19Q8TAB3 AL357033.4-201ENST00000617703 1807 ntBASIC19.39■□□□□ 0.7
PCDH19Q8TAB3 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDH19Q8TAB3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH19Q8TAB3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDH19Q8TAB3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 RBM17P1-201ENST00000453646 1190 ntBASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDH19Q8TAB3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 AC087499.1-201ENST00000418141 1075 ntBASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDH19Q8TAB3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PCDH19Q8TAB3 AC090164.3-201ENST00000610780 2143 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms