Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.97■□□□□ 0.15
CLDND2Q8NHS1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 AC022616.7-201ENST00000525383 220 ntBASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 AC139887.4-201ENST00000607877 719 ntBASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLDND2Q8NHS1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDND2Q8NHS1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CLDND2Q8NHS1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLDND2Q8NHS1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 KRT8P11-201ENST00000409686 1436 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AL049812.1-201ENST00000432563 2267 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 PRSS44-201ENST00000515154 1146 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 LINC01238-205ENST00000567549 1107 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AC141257.4-201ENST00000634557 245 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 AC136944.6-201ENST00000634818 245 ntBASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLDND2Q8NHS1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 AL138781.2-201ENST00000617896 1843 ntBASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 AC005332.8-201ENST00000622750 2735 ntBASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLDND2Q8NHS1 COX11P1-201ENST00000489116 835 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms