Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AC244107.1-201ENST00000442033 332 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC034105.1-201ENST00000563488 319 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC011840.4-201ENST00000578471 627 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC005336.2-201ENST00000593183 939 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 AC092364.2-202ENST00000597012 1073 ntBASIC15.68■□□□□ 0.1
CCDC168Q8NDH2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 RNA5SP415-201ENST00000517246 115 ntBASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AC023274.1-201ENST00000418278 595 ntBASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AC132008.2-207ENST00000454517 770 ntBASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CCDC168Q8NDH2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 RBM17P3-201ENST00000417687 1192 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 HLA-J-203ENST00000494367 1087 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 KRT18P28-201ENST00000453838 1332 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 TREX1-205ENST00000625293 1783 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 POM121L3P-201ENST00000419331 1163 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 SART3-203ENST00000546611 1184 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 AC008608.2-201ENST00000606089 416 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 AC010240.3-201ENST00000607688 395 ntBASIC15.66■□□□□ 0.1
CCDC168Q8NDH2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 HOXB1-202ENST00000577092 1414 ntBASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 AC002347.1-201ENST00000569543 541 ntBASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.65■□□□□ 0.1
CCDC168Q8NDH2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 AC099343.3-201ENST00000605834 2503 ntBASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC168Q8NDH2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms