Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 AC139713.2-201ENST00000641328 2723 ntBASIC15.6■□□□□ 0.09
COMMD1Q8N668 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COMMD1Q8N668 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
COMMD1Q8N668 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 PTBP1P-201ENST00000554374 1601 ntBASIC15.59■□□□□ 0.09
COMMD1Q8N668 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.59■□□□□ 0.09
COMMD1Q8N668 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COMMD1Q8N668 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD1Q8N668 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD1Q8N668 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
COMMD1Q8N668 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD1Q8N668 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.58■□□□□ 0.09
COMMD1Q8N668 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
COMMD1Q8N668 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COMMD1Q8N668 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 AC110285.5-201ENST00000611501 352 ntBASIC15.58■□□□□ 0.08
COMMD1Q8N668 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 AC141586.5-201ENST00000624546 2050 ntBASIC15.58■□□□□ 0.08
COMMD1Q8N668 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COMMD1Q8N668 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC15.58■□□□□ 0.08
COMMD1Q8N668 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms