Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CARFQ8N187 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 Z98044.1-201ENST00000632503 1764 ntBASIC17.81■□□□□ 0.44
CARFQ8N187 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.81■□□□□ 0.44
CARFQ8N187 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CARFQ8N187 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.81■□□□□ 0.44
CARFQ8N187 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CARFQ8N187 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.81■□□□□ 0.44
CARFQ8N187 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.8■□□□□ 0.44
CARFQ8N187 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.8■□□□□ 0.44
CARFQ8N187 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.8■□□□□ 0.44
CARFQ8N187 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.8■□□□□ 0.44
CARFQ8N187 AL645929.1-201ENST00000420084 975 ntBASIC17.8■□□□□ 0.44
CARFQ8N187 PVRIG2P-201ENST00000435460 978 ntBASIC17.8■□□□□ 0.44
CARFQ8N187 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 SPDYE13P-201ENST00000445314 798 ntBASIC17.8■□□□□ 0.44
CARFQ8N187 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.8■□□□□ 0.44
CARFQ8N187 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.8■□□□□ 0.44
CARFQ8N187 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CARFQ8N187 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.8■□□□□ 0.44
CARFQ8N187 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.8■□□□□ 0.44
CARFQ8N187 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CARFQ8N187 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CARFQ8N187 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.79■□□□□ 0.44
CARFQ8N187 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CARFQ8N187 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CARFQ8N187 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.79■□□□□ 0.44
CARFQ8N187 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.79■□□□□ 0.44
CARFQ8N187 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.79■□□□□ 0.44
CARFQ8N187 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CARFQ8N187 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CARFQ8N187 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.78■□□□□ 0.44
CARFQ8N187 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CARFQ8N187 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.78■□□□□ 0.44
CARFQ8N187 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.78■□□□□ 0.44
CARFQ8N187 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 AL391807.1-203ENST00000604392 2365 ntBASIC17.78■□□□□ 0.44
CARFQ8N187 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 MIR662-201ENST00000384847 95 ntBASIC17.78■□□□□ 0.44
CARFQ8N187 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.78■□□□□ 0.44
CARFQ8N187 AC092597.1-201ENST00000487352 616 ntBASIC17.78■□□□□ 0.44
CARFQ8N187 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.78■□□□□ 0.44
CARFQ8N187 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.78■□□□□ 0.44
CARFQ8N187 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 AC069148.1-201ENST00000608741 768 ntBASIC17.78■□□□□ 0.44
CARFQ8N187 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 AL161938.1-201ENST00000569833 2180 ntBASIC17.78■□□□□ 0.44
CARFQ8N187 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CARFQ8N187 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
CARFQ8N187 MTMR9LP-203ENST00000426597 1545 ntBASIC17.77■□□□□ 0.44
CARFQ8N187 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CARFQ8N187 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CARFQ8N187 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CARFQ8N187 AL357033.4-201ENST00000617703 1807 ntBASIC17.77■□□□□ 0.44
CARFQ8N187 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CARFQ8N187 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.77■□□□□ 0.44
CARFQ8N187 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.77■□□□□ 0.44
CARFQ8N187 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms