Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 MTMR9LP-203ENST00000426597 1545 ntBASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 AC020763.4-201ENST00000623414 4170 ntBASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 WIZP1-201ENST00000531444 2299 ntBASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ZNF440Q8IYI8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 RCC2P3-201ENST00000418112 1537 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 AC008550.1-201ENST00000511500 884 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 Z99916.2-201ENST00000604037 246 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 REXO1L10P-201ENST00000615707 1290 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 REXO1L12P-201ENST00000622156 912 ntBASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF440Q8IYI8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 AC112777.1-201ENST00000540175 1423 ntBASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 MIR4785-201ENST00000585005 73 ntBASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 AL109659.2-201ENST00000606809 1674 ntBASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF440Q8IYI8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms