Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 AC012618.2-201ENST00000428058 849 ntBASIC23.28■■□□□ 1.32
SMC5Q8IY18 KRT18P41-201ENST00000518924 1277 ntBASIC23.28■■□□□ 1.32
SMC5Q8IY18 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 AC233702.5-201ENST00000584107 538 ntBASIC23.28■■□□□ 1.32
SMC5Q8IY18 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 LETM1P2-201ENST00000597330 2178 ntBASIC23.28■■□□□ 1.32
SMC5Q8IY18 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.28■■□□□ 1.32
SMC5Q8IY18 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SMC5Q8IY18 AC026471.1-201ENST00000564629 3026 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 AC112777.1-201ENST00000540175 1423 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 NOC2LP1-202ENST00000452600 2235 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 ABHD17AP1-201ENST00000358206 933 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 UBE2SP1-201ENST00000450587 669 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 REXO2-216ENST00000544196 452 ntTSL 3 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.27■■□□□ 1.32
SMC5Q8IY18 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMC5Q8IY18 AL162741.1-201ENST00000565563 1558 ntBASIC23.27■■□□□ 1.32
SMC5Q8IY18 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 AC008556.1-201ENST00000610908 2040 ntBASIC23.26■■□□□ 1.31
SMC5Q8IY18 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.26■■□□□ 1.31
SMC5Q8IY18 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SMC5Q8IY18 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.25■■□□□ 1.31
SMC5Q8IY18 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.25■■□□□ 1.31
SMC5Q8IY18 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.25■■□□□ 1.31
SMC5Q8IY18 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SMC5Q8IY18 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMC5Q8IY18 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 REXO1L10P-201ENST00000615707 1290 ntBASIC23.24■■□□□ 1.31
SMC5Q8IY18 REXO1L12P-201ENST00000622156 912 ntBASIC23.24■■□□□ 1.31
SMC5Q8IY18 AL049637.2-201ENST00000641778 930 ntBASIC23.24■■□□□ 1.31
SMC5Q8IY18 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC5Q8IY18 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.24■■□□□ 1.31
SMC5Q8IY18 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms