Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM48Q8IWZ4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AC104076.2-201ENST00000448912 469 ntBASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 COX11P1-201ENST00000489116 835 ntBASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AC006011.2-201ENST00000621313 1158 ntBASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AL138966.2-201ENST00000621997 464 ntBASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRIM48Q8IWZ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 KRT8P45-201ENST00000414328 1447 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 TEX21P-204ENST00000641479 1693 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 LINC01238-205ENST00000567549 1107 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 AC140113.3-201ENST00000605663 199 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 AC139887.4-201ENST00000607877 719 ntBASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM48Q8IWZ4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 ARMC10P1-201ENST00000313754 855 ntBASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 AP000523.1-201ENST00000398242 1049 ntBASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM48Q8IWZ4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms