Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.95■□□□□ 0.94
TRIM50Q86XT4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.95■□□□□ 0.94
TRIM50Q86XT4 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 AC069148.1-201ENST00000608741 768 ntBASIC20.95■□□□□ 0.94
TRIM50Q86XT4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM50Q86XT4 AC141586.3-201ENST00000562166 1838 ntBASIC20.94■□□□□ 0.94
TRIM50Q86XT4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 AC034232.1-201ENST00000506026 1064 ntBASIC20.94■□□□□ 0.94
TRIM50Q86XT4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.94■□□□□ 0.94
TRIM50Q86XT4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 AL157888.1-201ENST00000631930 593 ntBASIC20.94■□□□□ 0.94
TRIM50Q86XT4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM50Q86XT4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AC093484.2-201ENST00000580996 2166 ntBASIC20.93■□□□□ 0.94
TRIM50Q86XT4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AL109659.2-201ENST00000606809 1674 ntBASIC20.93■□□□□ 0.94
TRIM50Q86XT4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AC079602.3-201ENST00000623931 403 ntBASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AC112497.1-201ENST00000624824 639 ntBASIC20.93■□□□□ 0.94
TRIM50Q86XT4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 AL032819.2-201ENST00000624543 2162 ntBASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TRIM50Q86XT4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 AL645929.1-201ENST00000420084 975 ntBASIC20.92■□□□□ 0.94
TRIM50Q86XT4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM50Q86XT4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms