Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 RCC2P6-201ENST00000526625 1557 ntBASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 PNMA6B-201ENST00000538162 1200 ntBASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRTM1Q86UE6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 AC092437.1-201ENST00000624794 1048 ntBASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 HLA-A-209ENST00000638375 975 ntBASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRTM1Q86UE6 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 CROCCP5-201ENST00000436658 830 ntBASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC026185.1-201ENST00000445748 174 ntBASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC068587.9-201ENST00000641814 219 ntBASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 AC135776.1-201ENST00000319817 2481 ntBASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRTM1Q86UE6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LRRTM1Q86UE6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms