Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 AC005082.1-201ENST00000413042 2259 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 HEIH-201ENST00000623091 1652 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 MFAP1P1-201ENST00000442257 1255 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB1Q86U70 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB1Q86U70 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 AC097488.1-201ENST00000507834 756 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB1Q86U70 AP003071.4-201ENST00000562276 1284 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.76■□□□□ 0.59
LDB1Q86U70 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.76■□□□□ 0.59
LDB1Q86U70 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 AL499627.1-201ENST00000569373 2188 ntBASIC18.76■□□□□ 0.59
LDB1Q86U70 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LDB1Q86U70 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LDB1Q86U70 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LDB1Q86U70 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.76■□□□□ 0.59
LDB1Q86U70 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 KRT8P3-201ENST00000519669 1449 ntBASIC18.75■□□□□ 0.59
LDB1Q86U70 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.75■□□□□ 0.59
LDB1Q86U70 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.75■□□□□ 0.59
LDB1Q86U70 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.75■□□□□ 0.59
LDB1Q86U70 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LDB1Q86U70 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 SNORA78-201ENST00000459373 127 ntBASIC18.75■□□□□ 0.59
LDB1Q86U70 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.75■□□□□ 0.59
LDB1Q86U70 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.75■□□□□ 0.59
LDB1Q86U70 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LDB1Q86U70 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.75■□□□□ 0.59
LDB1Q86U70 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LDB1Q86U70 MTMR9LP-203ENST00000426597 1545 ntBASIC18.74■□□□□ 0.59
LDB1Q86U70 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LDB1Q86U70 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.74■□□□□ 0.59
LDB1Q86U70 KRT8P32-201ENST00000512863 1461 ntBASIC18.74■□□□□ 0.59
LDB1Q86U70 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LDB1Q86U70 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 CRYGFP-201ENST00000418459 633 ntBASIC18.74■□□□□ 0.59
LDB1Q86U70 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.74■□□□□ 0.59
LDB1Q86U70 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 AC008622.2-201ENST00000617006 1229 ntBASIC18.74■□□□□ 0.59
LDB1Q86U70 AC068587.9-201ENST00000641814 219 ntBASIC18.74■□□□□ 0.59
LDB1Q86U70 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
LDB1Q86U70 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LDB1Q86U70 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LDB1Q86U70 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms