Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 AC097488.1-201ENST00000507834 756 ntBASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 SLC25A1P4-201ENST00000567977 778 ntBASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHMP1BQ7LBR1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 RCC2P6-201ENST00000526625 1557 ntBASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 AC005332.8-201ENST00000622750 2735 ntBASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CRYGFP-201ENST00000418459 633 ntBASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 ECEL1P3-201ENST00000427961 737 ntBASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHMP1BQ7LBR1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AC011506.1-201ENST00000474329 610 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 NAPSB-206ENST00000562112 1266 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 C2orf69P3-201ENST00000565542 1120 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AC130371.2-201ENST00000619443 611 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AL158211.5-201ENST00000623583 2518 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AC079598.2-202ENST00000546624 1451 ntBASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMP1BQ7LBR1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMP1BQ7LBR1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms