Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 AC004854.2-201ENST00000608450 1441 ntBASIC11.92□□□□□ -0.5
LINC00575Q6W349 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00575Q6W349 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00575Q6W349 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PARP1-202ENST00000366792 553 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AC007322.4-201ENST00000509611 723 ntBASIC11.91□□□□□ -0.5
LINC00575Q6W349 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AC010536.3-201ENST00000620306 533 ntBASIC11.91□□□□□ -0.5
LINC00575Q6W349 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00575Q6W349 AC135776.1-201ENST00000319817 2481 ntBASIC11.91□□□□□ -0.5
LINC00575Q6W349 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00575Q6W349 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 AC138028.4-201ENST00000564984 1845 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 SNAI3-AS1-205ENST00000568633 2096 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 AC141586.5-201ENST00000624546 2050 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 AC124067.4-201ENST00000519691 2379 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 CROCCP1-201ENST00000426910 5675 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 BMP1-204ENST00000397814 836 ntTSL 4 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 KRT19P1-201ENST00000405746 1186 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 RARRES2P4-201ENST00000514074 484 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 PCDHA12-202ENST00000613593 2588 ntBASIC11.9□□□□□ -0.5
LINC00575Q6W349 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LINC00575Q6W349 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
LINC00575Q6W349 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms