Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 BICD1-207ENST00000551848 1962 ntBASIC16.35■□□□□ 0.21
C11orf88Q6PI97 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C11orf88Q6PI97 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 DUSP5P2-201ENST00000426873 1033 ntBASIC16.34■□□□□ 0.21
C11orf88Q6PI97 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 AL589743.5-201ENST00000616611 1050 ntBASIC16.34■□□□□ 0.21
C11orf88Q6PI97 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 KRT8P17-201ENST00000453110 1448 ntBASIC16.34■□□□□ 0.21
C11orf88Q6PI97 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C11orf88Q6PI97 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C11orf88Q6PI97 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C11orf88Q6PI97 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
C11orf88Q6PI97 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
C11orf88Q6PI97 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 MCRIP2P1-201ENST00000394346 511 ntBASIC16.33■□□□□ 0.2
C11orf88Q6PI97 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 AC083880.1-201ENST00000608266 535 ntBASIC16.33■□□□□ 0.2
C11orf88Q6PI97 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.33■□□□□ 0.2
C11orf88Q6PI97 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C11orf88Q6PI97 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms