Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.76■■□□□ 1.07
KRT40Q6A162 WIZP1-201ENST00000531444 2299 ntBASIC21.76■■□□□ 1.07
KRT40Q6A162 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT40Q6A162 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KRT40Q6A162 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
KRT40Q6A162 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.75■■□□□ 1.07
KRT40Q6A162 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT40Q6A162 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT40Q6A162 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT40Q6A162 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.75■■□□□ 1.07
KRT40Q6A162 SLC25A1P4-201ENST00000567977 778 ntBASIC21.75■■□□□ 1.07
KRT40Q6A162 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.75■■□□□ 1.07
KRT40Q6A162 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 DGCR10-201ENST00000609839 495 ntBASIC21.75■■□□□ 1.07
KRT40Q6A162 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KRT40Q6A162 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
KRT40Q6A162 MTMR9LP-203ENST00000426597 1545 ntBASIC21.75■■□□□ 1.07
KRT40Q6A162 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.75■■□□□ 1.07
KRT40Q6A162 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KRT40Q6A162 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT40Q6A162 RBM17P1-201ENST00000453646 1190 ntBASIC21.74■■□□□ 1.07
KRT40Q6A162 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT40Q6A162 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT40Q6A162 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT40Q6A162 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT40Q6A162 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.74■■□□□ 1.07
KRT40Q6A162 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT40Q6A162 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.74■■□□□ 1.07
KRT40Q6A162 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.74■■□□□ 1.07
KRT40Q6A162 AP000525.1-201ENST00000608286 694 ntBASIC21.74■■□□□ 1.07
KRT40Q6A162 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT40Q6A162 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT40Q6A162 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.74■■□□□ 1.07
KRT40Q6A162 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
KRT40Q6A162 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
KRT40Q6A162 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KRT40Q6A162 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT40Q6A162 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.73■■□□□ 1.07
KRT40Q6A162 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
KRT40Q6A162 AC113347.1-201ENST00000413321 391 ntBASIC21.73■■□□□ 1.07
KRT40Q6A162 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT40Q6A162 MFAP1P1-201ENST00000442257 1255 ntBASIC21.73■■□□□ 1.07
KRT40Q6A162 AC097488.1-201ENST00000507834 756 ntBASIC21.73■■□□□ 1.07
KRT40Q6A162 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.73■■□□□ 1.07
KRT40Q6A162 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.73■■□□□ 1.07
KRT40Q6A162 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT40Q6A162 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.73■■□□□ 1.07
KRT40Q6A162 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
KRT40Q6A162 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KRT40Q6A162 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
KRT40Q6A162 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KRT40Q6A162 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT40Q6A162 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.72■■□□□ 1.07
KRT40Q6A162 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.72■■□□□ 1.07
KRT40Q6A162 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms