Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 AL032819.2-201ENST00000624543 2162 ntBASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 SPDYE15P-201ENST00000424157 909 ntBASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 AL671277.2-201ENST00000458060 996 ntBASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 KRT8P3-201ENST00000519669 1449 ntBASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PRAMEF17Q5VTA0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 FAM86EP-206ENST00000510506 987 ntBASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 NEK4P2-201ENST00000580004 1012 ntBASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 AC024243.1-201ENST00000609234 778 ntBASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PRAMEF17Q5VTA0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 MCCD1P1-208ENST00000445732 328 ntBASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 AC112907.2-201ENST00000448639 330 ntBASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PRAMEF17Q5VTA0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRAMEF17Q5VTA0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms