Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
ARFGEF3Q5TH69 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 MIR3180-5-201ENST00000583743 153 ntBASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
ARFGEF3Q5TH69 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 AL023284.2-201ENST00000405850 579 ntBASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 HCG4P8-203ENST00000443049 980 ntBASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 AC087289.5-201ENST00000586076 3175 ntBASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
ARFGEF3Q5TH69 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 FP475955.4-201ENST00000623131 1990 ntBASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ARFGEF3Q5TH69 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 RASA4DP-201ENST00000460726 1199 ntBASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 AC092597.1-201ENST00000487352 616 ntBASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ARFGEF3Q5TH69 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 HOXB1-202ENST00000577092 1414 ntBASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ARFGEF3Q5TH69 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms