Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 MIR662-201ENST00000384847 95 ntBASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 AL049812.1-201ENST00000432563 2267 ntBASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.92■■□□□ 1.1
SHROOM1Q2M3G4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC006333.2-201ENST00000607957 2099 ntBASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC104390.1-201ENST00000555663 520 ntBASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AP002414.4-201ENST00000589764 1148 ntBASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC092329.2-201ENST00000598402 547 ntBASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC099343.3-201ENST00000605834 2503 ntBASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.91■■□□□ 1.1
SHROOM1Q2M3G4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 BX276092.5-203ENST00000456199 560 ntBASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 UNC93B7-201ENST00000509439 705 ntBASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SHROOM1Q2M3G4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.89■■□□□ 1.1
SHROOM1Q2M3G4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 TPM4P1-201ENST00000436100 807 ntBASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 AL121672.3-201ENST00000608644 468 ntBASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SHROOM1Q2M3G4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 AC093525.10-201ENST00000625130 1569 ntBASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 AC026396.1-201ENST00000419388 421 ntBASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 AC068587.9-201ENST00000641814 219 ntBASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 HOXB1-202ENST00000577092 1414 ntBASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.88■■□□□ 1.09
SHROOM1Q2M3G4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms