Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDH1Q08174 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDH1Q08174 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH1Q08174 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDH1Q08174 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH1Q08174 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
PCDH1Q08174 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH1Q08174 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH1Q08174 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH1Q08174 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCDH1Q08174 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 MIR718-201ENST00000390190 70 ntBASIC18.12■□□□□ 0.49
PCDH1Q08174 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH1Q08174 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH1Q08174 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 AC026471.5-201ENST00000615068 467 ntBASIC18.12■□□□□ 0.49
PCDH1Q08174 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH1Q08174 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH1Q08174 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH1Q08174 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH1Q08174 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCDH1Q08174 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 MFAP1P1-201ENST00000442257 1255 ntBASIC18.11■□□□□ 0.49
PCDH1Q08174 AL355355.2-201ENST00000442321 338 ntBASIC18.11■□□□□ 0.49
PCDH1Q08174 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH1Q08174 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH1Q08174 AC097488.1-201ENST00000507834 756 ntBASIC18.11■□□□□ 0.49
PCDH1Q08174 KRT18P41-201ENST00000518924 1277 ntBASIC18.11■□□□□ 0.49
PCDH1Q08174 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDH1Q08174 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDH1Q08174 AP006294.2-201ENST00000641667 209 ntBASIC18.11■□□□□ 0.49
PCDH1Q08174 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH1Q08174 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH1Q08174 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCDH1Q08174 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDH1Q08174 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH1Q08174 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 WIZP1-201ENST00000531444 2299 ntBASIC18.1■□□□□ 0.49
PCDH1Q08174 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 AC073592.3-201ENST00000625118 1834 ntBASIC18.1■□□□□ 0.49
PCDH1Q08174 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH1Q08174 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH1Q08174 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDH1Q08174 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDH1Q08174 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.1■□□□□ 0.49
PCDH1Q08174 AC008622.2-201ENST00000617006 1229 ntBASIC18.1■□□□□ 0.49
PCDH1Q08174 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH1Q08174 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH1Q08174 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH1Q08174 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PCDH1Q08174 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH1Q08174 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH1Q08174 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH1Q08174 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDH1Q08174 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH1Q08174 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms