Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HIST1H1AQ02539 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HIST1H1AQ02539 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 UNC93B5-201ENST00000530315 699 ntBASIC14.37□□□□□ -0.11
HIST1H1AQ02539 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
HIST1H1AQ02539 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PRORSD1P-202ENST00000563365 2154 ntBASIC14.36□□□□□ -0.11
HIST1H1AQ02539 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H1AQ02539 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms