Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
H3F3AP84243 MIR4674-201ENST00000582457 87 ntBASIC16.79■□□□□ 0.28
H3F3AP84243 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 FAM87A-204ENST00000613235 858 ntBASIC16.79■□□□□ 0.28
H3F3AP84243 AC087289.5-201ENST00000586076 3175 ntBASIC16.79■□□□□ 0.28
H3F3AP84243 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H3F3AP84243 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.79■□□□□ 0.28
H3F3AP84243 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.78■□□□□ 0.28
H3F3AP84243 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 AL020996.1-203ENST00000536896 2307 ntBASIC16.78■□□□□ 0.28
H3F3AP84243 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.78■□□□□ 0.28
H3F3AP84243 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.78■□□□□ 0.28
H3F3AP84243 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.78■□□□□ 0.28
H3F3AP84243 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.78■□□□□ 0.28
H3F3AP84243 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.78■□□□□ 0.28
H3F3AP84243 MTMR9LP-203ENST00000426597 1545 ntBASIC16.78■□□□□ 0.28
H3F3AP84243 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 AL031598.1-201ENST00000561511 1773 ntBASIC16.78■□□□□ 0.28
H3F3AP84243 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.78■□□□□ 0.28
H3F3AP84243 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H3F3AP84243 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
H3F3AP84243 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 AC008556.1-201ENST00000610908 2040 ntBASIC16.77■□□□□ 0.28
H3F3AP84243 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.77■□□□□ 0.28
H3F3AP84243 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.77■□□□□ 0.28
H3F3AP84243 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.77■□□□□ 0.28
H3F3AP84243 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.77■□□□□ 0.28
H3F3AP84243 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.77■□□□□ 0.28
H3F3AP84243 MCCD1P1-208ENST00000445732 328 ntBASIC16.77■□□□□ 0.28
H3F3AP84243 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 ECEL1P2-202ENST00000465689 757 ntBASIC16.77■□□□□ 0.28
H3F3AP84243 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
H3F3AP84243 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
H3F3AP84243 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.77■□□□□ 0.28
H3F3AP84243 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
H3F3AP84243 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.77■□□□□ 0.27
H3F3AP84243 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
H3F3AP84243 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
H3F3AP84243 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H3F3AP84243 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H3F3AP84243 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.27
H3F3AP84243 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.76■□□□□ 0.27
H3F3AP84243 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.76■□□□□ 0.27
H3F3AP84243 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3AP84243 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
H3F3AP84243 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3AP84243 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.76■□□□□ 0.27
H3F3AP84243 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3AP84243 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H3F3AP84243 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.76■□□□□ 0.27
H3F3AP84243 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.76■□□□□ 0.27
H3F3AP84243 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
H3F3AP84243 AC133561.5-201ENST00000635547 218 ntBASIC16.76■□□□□ 0.27
H3F3AP84243 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms